act.h

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/* Copyright (c) 2008-2022 the MRtrix3 contributors.
 *
 * This Source Code Form is subject to the terms of the Mozilla Public
 * License, v. 2.0. If a copy of the MPL was not distributed with this
 * file, You can obtain one at http://mozilla.org/MPL/2.0/.
 *
 * Covered Software is provided under this License on an "as is"
 * basis, without warranty of any kind, either expressed, implied, or
 * statutory, including, without limitation, warranties that the
 * Covered Software is free of defects, merchantable, fit for a
 * particular purpose or non-infringing.
 * See the Mozilla Public License v. 2.0 for more details.
 *
 * For more details, see http://www.mrtrix.org/.
 */
 
#ifndef __dwi_tractography_act_act_h__
#define __dwi_tractography_act_act_h__
 
#include "app.h"
#include "header.h"
 
 
// Actually think it's preferable to not use these
#define ACT_WM_INT_REQ 0.0
#define ACT_WM_ABS_REQ 0.0
 
#define GMWMI_ACCURACY 0.01 // Absolute value of tissue proportion difference
 
// Number of times a backtrack attempt will be made from a certain maximal track length before the length of truncation is increased
#define ACT_BACKTRACK_ATTEMPTS 3
 
 
namespace MR
{
 
  namespace App { class OptionGroup; }
 
  namespace DWI
  {
 
    namespace Tractography
    {
 
      class Properties;
 
      namespace ACT
      {
 
        extern const App::OptionGroup ACTOption;
 
        void load_act_properties (Properties& properties);
 
        void verify_5TT_image (const Header&);
 
 
      }
    }
  }
}
 
#endif