arc.h

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/* Copyright (c) 2008-2022 the MRtrix3 contributors.
 *
 * This Source Code Form is subject to the terms of the Mozilla Public
 * License, v. 2.0. If a copy of the MPL was not distributed with this
 * file, You can obtain one at http://mozilla.org/MPL/2.0/.
 *
 * Covered Software is provided under this License on an "as is"
 * basis, without warranty of any kind, either expressed, implied, or
 * statutory, including, without limitation, warranties that the
 * Covered Software is free of defects, merchantable, fit for a
 * particular purpose or non-infringing.
 * See the Mozilla Public License v. 2.0 for more details.
 *
 * For more details, see http://www.mrtrix.org/.
 */
 
#ifndef __dwi_tractography_resampling_arc_h__
#define __dwi_tractography_resampling_arc_h__
 
 
#include "dwi/tractography/resampling/resampling.h"
 
 
namespace MR {
  namespace DWI {
    namespace Tractography {
      namespace Resampling {
 
 
 
        // Also handles resampling along a fixed line
        class Arc : public BaseCRTP<Arc> { MEMALIGN(Arc)
 
            using value_type = float;
            using point_type = Eigen::Vector3f;
 
            enum class state_t { BEFORE_START, AFTER_START, BEFORE_END, AFTER_END };
 
          private:
            class Plane { MEMALIGN(Plane)
              public:
                Plane (const point_type& pos, const point_type& dir) :
                    n (dir)
                {
                  n.normalize();
                  d = n.dot (pos);
                }
                value_type dist (const point_type& pos) const { return n.dot (pos) - d; }
              private:
                point_type n;
                value_type d;
            };
 
            vector<Plane> planes;
 
          public:
            Arc (const size_t n, const point_type& s, const point_type& e) :
                nsamples (n),
                start (s),
                mid (0.5*(s+e)),
                end (e),
                idx_start (0),
                idx_end (0)
            {
              init_line();
            }
 
            Arc (const size_t n, const point_type& s, const point_type& w, const point_type& e) :
                nsamples (n),
                start (s),
                mid (w),
                end (e),
                idx_start (0),
                idx_end (0)
            {
              init_arc();
            }
 
            bool operator() (const Streamline<>&, Streamline<>&) const override;
            bool valid() const override { return nsamples; }
 
          private:
            const size_t nsamples;
            const point_type start, mid, end;
 
            mutable size_t idx_start, idx_end;
            mutable point_type start_dir, mid_dir, end_dir;
 
            void init_line();
            void init_arc();
 
 
            state_t state (const point_type&) const;
 
        };
 
 
 
      }
    }
  }
}
 
#endif