matrix.h File Reference

#include "image.h"
#include "types.h"
#include "file/ofstream.h"
#include "fixel/index_remapper.h"

Go to the source code of this file.

Classes
class	MR::Fixel::Matrix::InitElement
class	MR::Fixel::Matrix::InitFixel
class	MR::Fixel::Matrix::NormElement
class	MR::Fixel::Matrix::NormFixel
class	MR::Fixel::Matrix::Reader

Namespaces
namespace	MR
namespace	MR::Fixel
namespace	MR::Fixel::Matrix

Typedefs
using	MR::Fixel::Matrix::index_image_type = uint64_t
using	MR::Fixel::Matrix::fixel_index_type = uint32_t
using	MR::Fixel::Matrix::count_type = uint32_t
using	MR::Fixel::Matrix::connectivity_value_type = float
using	MR::Fixel::Matrix::init_matrix_type = vector< InitFixel >

Functions
init_matrix_type	MR::Fixel::Matrix::generate (const std::string &track_filename, Image< fixel_index_type > &index_image, Image< bool > &fixel_mask, const float angular_threshold)
void	MR::Fixel::Matrix::normalise_and_write (init_matrix_type &matrix, const connectivity_value_type threshold, const std::string &path, const KeyValues &keyvals=KeyValues())