reorient.h File Reference

#include "algo/threaded_loop.h"
#include "math/SH.h"
#include "math/least_squares.h"
#include "adapter/jacobian.h"
#include "registration/multi_contrast.h"

Go to the source code of this file.

Classes
class	MR::Registration::Transform::LinearKernelMultiContrast< FODImageType >
class	MR::Registration::Transform::LinearKernel< FODImageType >
class	MR::Registration::Transform::NonLinearKernelMultiContrast< FODImageType >
class	MR::Registration::Transform::NonLinearKernel< FODImageType >

Namespaces
namespace	MR
namespace	MR::Registration
namespace	MR::Registration::Transform

Functions
FORCE_INLINE Eigen::MatrixXd	MR::Registration::Transform::aPSF_weights_to_FOD_transform (const int num_SH, const Eigen::MatrixXd &directions)
FORCE_INLINE vector< vector< ssize_t > >	MR::Registration::Transform::multiContrastSetting2start_nvols (const vector< MultiContrastSetting > &mcsettings, size_t &max_n_SH)
template<class FODImageType >
void	MR::Registration::Transform::reorient (FODImageType &input_fod_image, FODImageType &output_fod_image, const transform_type &transform, const Eigen::MatrixXd &directions, bool modulate=false, vector< MultiContrastSetting > multi_contrast_settings=vector< MultiContrastSetting >())
template<class FODImageType >
void	MR::Registration::Transform::reorient (const std::string progress_message, FODImageType &input_fod_image, FODImageType &output_fod_image, const transform_type &transform, const Eigen::MatrixXd &directions, bool modulate=false, vector< MultiContrastSetting > multi_contrast_settings=vector< MultiContrastSetting >())
template<class FODImageType >
void	MR::Registration::Transform::reorient_warp (const std::string progress_message, FODImageType &fod_image, Image< default_type > &warp, const Eigen::MatrixXd &directions, const bool modulate=false, vector< MultiContrastSetting > multi_contrast_settings=vector< MultiContrastSetting >())
template<class FODImageType >
void	MR::Registration::Transform::reorient_warp (FODImageType &fod_image, Image< default_type > &warp, const Eigen::MatrixXd &directions, const bool modulate=false, vector< MultiContrastSetting > multi_contrast_settings=vector< MultiContrastSetting >())